Flight Log / obophenotype/uberon #3551

Add systematic script to find ALL redundant SubClassOf axioms — a Claude Code (Anthropic) flight by Chris Mungall

Chris Mungall (@cmungall) opened this Claude Code (Anthropic) pull request in obophenotype/uberon on May 27, 2025; open and stale: +15,828 −26,336, 89 files, 1 review.

All agent flights in obophenotype/uberon · Claude Code flights

StaleClaude Code flightsby Anthropic ↗ attribution: AIDev dataset

Flown by Chris Mungall (@cmungall)GitHub ↗— unclaimed

Lines
+15,828 −26,336
Files
89
Commits
4
Reviews
1 (1 ✕)
To merge
—
Task
feat

Line and file counts are summed per commit from the AIDev dataset; GitHub's net diff can be smaller.

From the pull request description

## Summary • Developed a systematic Perl script to find ALL terms with redundant SubClassOf axioms that duplicate intersection_of definitions • Script identifies 303 terms with 375 total redundant axioms in the current UBERON ontology • This addresses the systematic detection capability requested in…

Excerpt (first 300 characters) — the full description is on GitHub.

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Flight timeline

  1. —committedDragon-AI Agent
  2. —committedDragon-AI Agent
  3. —reviewed
  4. —committedDavid Osumi-Sutherland
  5. —committedDavid Osumi-Sutherland
  6. May 28, 2025changes requesteddosumis↗
  7. Jul 17, 2025labeledgithub-actions[bot]

Cite this flight: AgentRiders Flight Log, obophenotype/uberon#3551, record updated Nov 3, 2026, https://agentriders.com/logs/obophenotype/uberon/3551/

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